miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|58329700|gb|AJ766035.1|AJ766035 GGGTTTCCAGGGTTCGGCACCACCATGAATATCCTTTATGGTGAACGCGTGTGCGGTCAAGGTGACGTGGATGACATGAA
CACAATTGTCACTCATTATTTATATTATCTTGACTTGATGGGTGTGGACCGTGAGGAAGCTGGGCCCCACGAGGTGCTGA
CGTGTGCAGAACAAAAACCGTTCAATCCGTCAGCTCCTACCCAAGCGTCTTCAAGGTAAGCGTGTTTGTTTATCGTTCTT
GATTCTCTCCATGAATAAATGGTGGTTGCGTGGAAATATGTAAGTTTGTGGAATCGTCTGTTAATAGATTTGAAATTTGA
TTCGTTGTTAAAGCGTGTTGTATTTAGTTTGTGAATTTTGCGATATCGAAGTTATATATGAGTATA




Most similar to sp|Q9MA41|CTL1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9MA41|CTL1_ARATH Chitinase-like protein 1 OS=Arabidopsis
           thaliana GN=CTL1 PE=1 SV=1
          Length = 321

 Score =  106 bits (265), Expect = 4e-23
 Identities = 45/69 (65%), Positives = 57/69 (82%)
 Frame = +1

Query: 7   PGFGTTMNILYGERVCGQGDVDDMNTIVTHYLYYLDLMGVDREEAGPHEVLTCAEQKPFN 186
           P FG+TMN+LYGE  CGQG +D MN I++HYLY+LDLMG+ RE+AGP++ L+CAEQKPFN
Sbjct: 252 PTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSCAEQKPFN 311

Query: 187 PSAPTQASS 213
           PS    +SS
Sbjct: 312 PSTVPSSSS 320